Proceedings of the 2016 International Conference on Artificial Intelligence and Engineering Applications

Binding Mechanism Analysis between AhR Protein and Typical Polybrominated Diphenyl Ether via Molecule Docking

Authors
Long Jiang, Gaojun Liu, Qing Li
Corresponding Author
Long Jiang
Available Online November 2016.
DOI
https://doi.org/10.2991/aiea-16.2016.83How to use a DOI?
Keywords
Polybrominated diphenyl ethers; aryl hydrocarbon receptor; homology modeling; molecular docking.
Abstract

In this paper, BDE-85 was selected as the typical polybrominated diphenyl ether (PBDE) because of its obvious biological toxicity and the receptor binding affinity (RBA) was taken as the index of biological toxicity. By using the homology modeling, the aryl hydrocarbon receptor (AhR) protein molecule was established for researching the binding mechanism between the AhR protein and BDE-85. The obtained results showed that: the RSMD value of the established AhR protein was 0.049, present reasonable molecule structure and amino acid sequence; among active residues, the hydrophobic amino form a hydrophobic region to improve the molecule docking between the AhR protein and BDE-85, resulting in significant biological toxicity of BDE-85.

Copyright
© 2016, the Authors. Published by Atlantis Press.
Open Access
This is an open access article distributed under the CC BY-NC license (http://creativecommons.org/licenses/by-nc/4.0/).

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Volume Title
Proceedings of the 2016 International Conference on Artificial Intelligence and Engineering Applications
Series
Advances in Computer Science Research
Publication Date
November 2016
ISBN
978-94-6252-270-1
ISSN
2352-538X
DOI
https://doi.org/10.2991/aiea-16.2016.83How to use a DOI?
Copyright
© 2016, the Authors. Published by Atlantis Press.
Open Access
This is an open access article distributed under the CC BY-NC license (http://creativecommons.org/licenses/by-nc/4.0/).

Cite this article

TY  - CONF
AU  - Long Jiang
AU  - Gaojun Liu
AU  - Qing Li
PY  - 2016/11
DA  - 2016/11
TI  - Binding Mechanism Analysis between AhR Protein and Typical Polybrominated Diphenyl Ether via Molecule Docking
BT  - Proceedings of the 2016 International Conference on Artificial Intelligence and Engineering Applications
PB  - Atlantis Press
SP  - 464
EP  - 467
SN  - 2352-538X
UR  - https://doi.org/10.2991/aiea-16.2016.83
DO  - https://doi.org/10.2991/aiea-16.2016.83
ID  - Jiang2016/11
ER  -